Niklas Reimer
Ph.D. Candidate
Medizinisches Datenintegrationszentrum (MeDIC) Teamleiter „Refinement“ – Universitätsklinikum Schleswig-Holstein
Universitätsklinikum Schleswig-Holstein
Ratzeburger Allee 160
23538 Lübeck
Position and responsibilities
Scientific profile
Selected Publications
Position and responsibilities
- Health Information interoperability
- Omics pipeline development
- Omics data integration
- Metadata guided data integration
- UKSH/UzL PM4Onco
- UKSH Medical Data Integration Center (MeDIC)
- UCCSH Molecular Tumor Board
Scientific profile
Niklas Reimer graduated in Medical Informatics at the Universität zu Lübeck in 2020. Since then, he has been a member of the Group for Medical Systems Biology and is involved in the development of IT solutions for the molecular tumor board of the University Cancer Center Schleswig-Holstein. He works closely with the MIRACUM consortium and the IT Center for Clinical Research, Universität zu Lübeck.
CV
Scientific career
- since 2024 Research Associate, Medical Data Integration Center (MeDIC), University Hospital Schleswig-Holstein, Campus Lübeck
- since 2020 Research Associate, Medical Systems Biology, Lübeck Institute of Experimental Dermatology, Universität zu Lübeck
- 2019 – 2020 Master of Science (Medical Informatics), Universität zu Lübeck
- 2015 – 2019 Bachelor of Science (Medical Informatics), Universität zu Lübeck
Memberships
- Deutsche Gesellschaft für Medizinische Informatik, Biometrie und Epidemiologie (GMDS)
- Gesellschaft für Informatik (GI)
- Verband der Elektrotechnik Elektronik Informationstechnik (VDE)
Selected Publications
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Boehm, D.; Reimer, N.; Christoph, J.; Scheiter, A.; Unberath, P. Building a Knowledge Base for Variant Annotation Using Therapy Recommendations in cBioPortal. In Studies in Health Technology and Informatics; Andrikopoulou, E., Gallos, P., Arvanitis, T. N., Austin, R., Benis, A., Cornet, R., Chatzistergos, P., Dejaco, A., Dusseljee-Peute, L., Mohasseb, A., Natsiavas, P., Nakkas, H., Scott, P., Eds.; IOS Press, 2025. https://doi.org/10.3233/SHTI250281.
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Bossenz, J.; Manuilova, I.; Weise, A. B.; Schulze, S.; Hiemer, S.; Eszlinger, M.; Boerries, M.; Busch, H.; Boehm, D.; Unberath, P.; Reimer, N.; Strantz, C.; Christoph, J. Prototypical Visualization of Patient Similarities in cBioPortal to Enhance Decision-Making in Molecular Tumor Boards. In Studies in Health Technology and Informatics; Andrikopoulou, E., Gallos, P., Arvanitis, T. N., Austin, R., Benis, A., Cornet, R., Chatzistergos, P., Dejaco, A., Dusseljee-Peute, L., Mohasseb, A., Natsiavas, P., Nakkas, H., Scott, P., Eds.; IOS Press, 2025. https://doi.org/10.3233/SHTI250385.
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Witte, H. M.; Riedl, J.; Künstner, A.; Fähnrich, A.; Ketzer, J.; Fliedner, S. M. J.; Reimer, N.; Bernard, V.; Von Bubnoff, N.; Merz, H.; Busch, H.; Feller, A.; Gebauer, N. Molecularly Stratified Treatment Options in Primary Refractory DLBCL/HGBL with MYC and BCL2 or BCL6 Rearrangements (HGBL, NOS with MYC/BCL6). Targ Oncol 2023, 18 (5), 749–765. https://doi.org/10.1007/s11523-023-00983-5.
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Witte, H. M.; Fähnrich, A.; Künstner, A.; Riedl, J.; Fliedner, S. M. J.; Reimer, N.; Hertel, N.; von Bubnoff, N.; Bernard, V.; Merz, H.; Busch, H.; Feller, A.; Gebauer, N. Primary Refractory Plasmablastic Lymphoma: A Precision Oncology Approach. Frontiers in Oncology 2023, 13. https://doi.org/10.3389/fonc.2023.1129405.
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Bastian, L.; Hartmann, A. M.; Beder, T.; Hänzelmann, S.; Kässens, J.; Bultmann, M.; Hoeppner, M. P.; Franzenburg, S.; Wittig, M.; Franke, A.; Nagel, I.; Spielmann, M.; Reimer, N.; Busch, H.; Schwartz, S.; Steffen, B.; Viardot, A.; Döhner, K.; Kondakci, M.; Wulf, G.; Wendelin, K.; Renzelmann, A.; Kiani, A.; Trautmann, H.; Neumann, M.; Gökbuget, N.; Brüggemann, M.; Baldus, C. D. UBTF::ATXN7L3 Gene Fusion Defines Novel B Cell Precursor ALL Subtype with CDX2 Expression and Need for Intensified Treatment. Leukemia 2022. https://doi.org/10.1038/s41375-022-01557-6.
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Unberath, P.; Mahlmeister, L.; Reimer, N.; Busch, H.; Boerries, M.; Christoph, J. Searching of Clinical Trials Made Easier in cBioPortal Using Patients’ Genetic and Clinical Profiles. Appl Clin Inform 2022, 13 (02), 363–369. https://doi.org/10.1055/s-0042-1743560.
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Reimer, N.; Unberath, P.; Busch, H.; Börries, M.; Metzger, P.; Ustjanzew, A.; Renner, C.; Prokosch, H.-U.; Christoph, J. Challenges and Experiences Extending the cBioPortal for Cancer Genomics to a Molecular Tumor Board Platform. In Studies in Health Technology and Informatics; IOS Press, 2021. https://doi.org/10.3233/SHTI210169.
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Reimer, N.; Unberath, P.; Busch, H.; Ingenerf, J. Implementing a FHIR-Based Interface between cBioPortal for Cancer Genomics and Hospital Information Systems. 2021. https://doi.org/10.3205/21GMDS033.
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Reimer, N.; Unberath, P.; Busch, H.; Ingenerf, J. FhirSpark – Implementing a Mediation Layer to Bring FHIR to the cBioPortal for Cancer Genomics. In Studies in Health Technology and Informatics; Mantas, J., Stoicu-Tivadar, L., Chronaki, C., Hasman, A., Weber, P., Gallos, P., Crişan-Vida, M., Zoulias, E., Chirila, O. S., Eds.; IOS Press, 2021. https://doi.org/10.3233/SHTI210169.
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Reimer, N.; Ulrich, H.; Busch, H.; Kock-Schoppenhauer, A.-K.; Ingenerf, J. openEHR Mapper – A Tool to Fuse Clinical and Genomic Data Using the openEHR Standard. In Studies in Health Technology and Informatics; Röhrig, R., Beißbarth, T., Brannath, W., Prokosch, H.-U., Schmidtmann, I., Stolpe, S., Zapf, A., Eds.; IOS Press, 2021. https://doi.org/10.3233/SHTI210055.
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Kock-Schoppenhauer, A.-K.; Schreiweis, B.; Ulrich, H.; Reimer, N.; Wiedekopf, J.; Kinast, B.; Busch, H.; Bergh, B.; Ingenerf, J. Medical Data Engineering – Theory and Practice. In Advances in Model and Data Engineering in the Digitalization Era; Bellatreche, L., Chernishev, G., Corral, A., Ouchani, S., Vain, J., Eds.; Springer International Publishing: Cham, 2021; Vol. 1481, pp 269–284. https://doi.org/10.1007/978-3-030-87657-9_21.
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Reimer, N.; Busch, H.; Ingenerf, J. Deploying a Molecular Tumor Board on an Open Platform. In Student Conference 2020, Medical Engineering Science, Medical Informatics, Biomedical Engineering and Auditory Technology; Buzug, T. M., Handels, H., Klein, S., Mertins, A., Eds.; Infinite Science Publishing: Lübeck, 2020; pp 139–142.
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Groppe, S.; Reimer, N. Code Generation for Big Data Processing in the Web Using WebAssembly. Open Journal of Cloud Computing (OJCC) 2019, 6 (1), 1–15.